PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_6FDB440FB.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 69aa    MW: 7674.48 Da    PI: 7.124
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_6FDB440FB.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.31.7e-094502159
                           -EEEEEE-ST...T---EEEEEE-SSSTT.....EEEEEEES--SS- CS
                   WRKY 21 prsYYrCtsa...gCpvkkkversaedpk.....vveitYegeHnhe 59
                            r+YYrCt +   gCp+k+ v+r+++d++       +++Y +eH ++
  Traes_5AL_6FDB440FB.1  4 CRNYYRCTNStnqGCPAKRTVQRNDDDGSddgrpKYTVVYISEHSCK 50
                           79*****9888889**********99986444446899999999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031063.9E-11450IPR003657WRKY domain
SuperFamilySSF1182901.02E-9451IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-10451IPR003657WRKY domain
SMARTSM007742.7E-6551IPR003657WRKY domain
PROSITE profilePS508119.844530IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MAICRNYYRC TNSTNQGCPA KRTVQRNDDD GSDDGRPKYT VVYISEHSCK ATESAAVPVI  60
LETTVRTDT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010238804.12e-23PREDICTED: probable WRKY transcription factor 29
TrEMBLW5EY704e-45W5EY70_WHEAT; Uncharacterized protein
STRINGMLOC_68369.16e-36(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.15e-07WRKY DNA-binding protein 54
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]